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Complete mitogenome, phylogenetic and SNP-data analysis of jakumaru (Bos taurus), a prime bull from a Peruvian breeding core herd
Date Issued
2025-01-22
Author(s)
Romero Avila, Yolanda Madelein
Figueroa Venegas, Deyanira Antonella
Quilcate Pairazamán, Carlos Enrique
León Trinidad, Silvia Eliana
DOI
10.47278/journal.ijvs/2024.007
Abstract
This study provides a comprehensive mitochondrial genome sequence and a phylogenetic analysis of Jakumaru (Bos taurus), a prominent bull from a Peruvian breeding program. The mitochondrial genome, spanning 16,340bp, comprises 13 protein-coding genes, 22 tRNA genes, and 2 rRNA genes, with a GC content of 40%. The gene arrangement and structural organization are highly conserved, closely resembling those of related Bovine species, indicating a stable genomic architecture essential for mitochondrial function. Phylogenetic analysis, incorporating 35 complete bovine mitochondrial genomes, positions Jakumaru within Subclade I, revealing a close relationship with European Simmental cattle. The study emphasizes the biological diversity and the evolution of the Simmental breed, influenced by natural selection, breeding practices, and genetic drift. These findings enhance our understanding of the breed's genetic variation and its evolution, particularly in the context of its importance in Peru
This study provides a comprehensive mitochondrial genome sequence and a phylogenetic analysis of Jakumaru (Bos taurus), a prominent bull from a Peruvian breeding program. The mitochondrial genome, spanning 16,340bp, comprises 13 protein-coding genes, 22 tRNA genes, and 2 rRNA genes, with a GC content of 40%. The gene arrangement and structural organization are highly conserved, closely resembling those of related Bovine species, indicating a stable genomic architecture essential for mitochondrial function. Phylogenetic analysis, incorporating 35 complete bovine mitochondrial genomes, positions Jakumaru within Subclade I, revealing a close relationship with European Simmental cattle. The study emphasizes the biological diversity and the evolution of the Simmental breed, influenced by natural selection, breeding practices, and genetic drift. These findings enhance our understanding of the breed's genetic variation and its evolution, particularly in the context of its importance in Peru